I can pretty confidently say now that, at least with the juice I'm using, that it's NOT the plastic dissolving and discoloring the juice, it's the juice itself darkening inside the carto and back-flowing out into the tank.
I pulled the carto out, cleaned the tank, refilled it, and have kept a careful watch, and I can pretty definitely tell now that the darker juice is coming out from the punched hole. So it's likely the heat from the coils that's blackening the juice, and not the plastic parts in the tank, which is a relief. I've noticed dark juice in all other clearos and cartos I've used, though it's usually "out of sight and out of mind" -- it's just that much more dramatic in the clear poly tank, especially since the dark juice was stratified on the bottom of the tank.
Just to clarify, I've got a polycarbonate DCT carto -- it was the black plastic end caps that I was suspicious of. I have a polypropylene clearo as well (wick type) and I notice the juice darkening there too, but more gradually, and it's not stratified like in the DCT carto, so it's less dramatic.
I'm still liking the DCT carto a lot, though I just tried a 2.5 ohm carto in it and had to go back to the 1.6 it came with, since on my leo battery, the 2.5 ohm device hardly produces any vapor or flavor, and gets frightfully hot. I'm guessing the battery doesn't supply enough power to drive it properly, though I'd bet it would be fine on a VV battery. I suppose it's possible that it's bum carto, but I'll be sticking with the LR devices with this tank on the leo batteries.
I think my next buy will be a vivi nova. I see a lot of buzz about it, and I like the idea of a rebuildable system.