In the box that isnt included? A box.

Basically you don't get the nice looking black box that looks nice in mall kiosks and all the parts come in individual little boxes. Seriously not a big deal.
As for "red LED automatic" versus "red LED manual"...well, the "Red LED" part simply means that the end of the battery has a red LED light that turns on when activated. An automatic battery has a hole in the end that detects when you are inhaling it and automatically turns on the battery. The manual battery is sealed but has a small button on the side so it only turns on when you push the button.
At this point you are probably thinking that you want the automatic. The truth is you probably do not. Some automatic batteries will activate accidentally (not usually a big problem with 510 batteries, but still a risk), but the bigger problem is that you kinda have to give them a hard "primer puff" to get them to turn on and they are unsealed meaning that e-liquid can leak into the battery and lead to its premature demise. The manual batteries, on the other hand, very quickly become second nature to operate and its actually really nice to have full control over your vape so, for example, you can press the button a second
before you start inhaling to warm it up a little... Also with the manual battery, it won't cut you off mid-inhale unless you release the button intentionally. Manual batteries are generally sealed which means it is safe to
drip e-liquid directly onto the atomizer without fear of a flood dripping into the battery. All around, a manual battery is going to give you a better vaping experience, but some people do still prefer the automatic battery.