OK, from reading down this thread, here is what I think may have happened here. I'm just kind of piecing this together, so a may be a million miles off base.
RTS received a buyout "offer" from a big company, and declined. The big company started poking around, and decided to make trouble for RTS, because maybe they figured if you got in some sort of trouble RTS would sell. They had their hot dog lawyers look up regulations regarding the type of processing RTS is doing, and then poked around and found that RTS didn't have some type of obscure certification that they didn't know about, so they called the feds. The feds came out, and didn't like dudes demeanor for whatever reason when he was answering their questions, so they too decided to cause him a problem.
I REALLY hope this all works itself out. You should know that you have a pretty large, and getting larger every day community behind you.
If I were the business owner in this case, my first stop would be the lawyer, and it sounds like it was. My next stop would be elected officials, preferably federal (US Congressman, and US Senators). They should all have offices locally you can go to. They may have the juice to call off the dogs, and also help get the facility into compliance, if in fact it even isn't. I wouldn't be afraid to talk to these people. Your state rep may also be able to help you out. IME, it's hard to find an elected official that is more all about small business than a state representative.
I think it's best to try and nip this thing in the bud before it develops it's own momentum.