If it is PG, this is the best thing to do, but what you are doing is not bad. Ideally you distribute to smaller bottles for storage and use one at a time, in order to not risk contamination of the rest every time you want some. Frozen VG is like a gel and barely flows, so for me to just take from a large bottle occasionally would have me pulling the bottle out in the morning to be able to use it in the afternoon. PG is still quite liquid in most freezers, so it is more practical to do what you are doing. But also realize that any cold liquid will condense water from the air, so it is best to bring it to room temp before opening. All nic will oxidize with time (much much slower when cold). I would rather have a small bottle I use over some weeks, and more small bottles of fresh and clean nic in the freezer waiting for me, than have a big bottle, all of which is oxidizing every time it is opened and brought to room temp.
I have 100 mg VG that is almost 4 years old now in the freezer, and it is unchanged from the day I put it into storage.