the metal body of a battery is all negative/ground. If there is a tear or missing part in your battery's jacket and it's resting against the metal body of the mod (with the battery in backwards) . . . .. you've got a full-on hard short.
. . . . . methinks
Recently tried out a K1000 e-pipe and the Kamry instructions tell you to do just that - by inserting the battery positive toward the switch. If you saw that switch design... yeah, that's a really bad idea that could easily result in the problem you describe if there was damage to the battery jacket. Short version: I think Kamry screwed up the instructions in their manual-ette.
Doing it according to the Kamry instructions doesn't make a lot of sense by either the design of the switch, or by creating a "center post negative" device - which flies in the face of current industry standards. The Kamry instructions for the K1000 have created problems for people trying to use in-line voltage meters or the likes of the nhaler VV Silencer as well, frying devices that don't have reverse polarity protection.
On a purely electrical level - in a mech, no it doesn't matter. But you have to take into consideration switch and battery contact design of the mech as well.