What's this about alternating batteries? Sounds like rubbish to me. The laptop, on which I am typing this has 6 18650 batteries in it, and they do not alternate. My hybrid car, with several hundred pounds of lithium batteries (might even be 18650s) does not alternate the cells.
I can see not combining an old cell with a new cell, as that is even a long known no-no even with alkaline batteries. But rotating is just a neurosis, unless you can back that up.
In stacked batteries, what goes through one, goes through the other. One does not work harder than the other because it is in front or on top. Electricity does not have a concept of front or top.
What you say is true, but what you don't say is important. What goes through one battery in a stack does go through the other. The problem becomes that they do not "age" at the same rates simply because no two are exactly identical. None of us buy thousands of batteries then spend time and effort, using test equipment costing thousands of dollars, to make sure we have pairs that are, truly, matched pairs. Alternating batteries can help mitigate that problem.
Another point is that the batteries in your laptop are not IMR and have some rather extensive, by comparison, internal and external protection added to them. We've all see the photos of what can happen to a laptop when those protections fail, so taking the added precaution of alternating locations when stacking seems only prudent. There are also photos of "electric" cars going up in smoke for no apparent reason and, again, some heavy protection schemes are used in them as well.
We are all free to make our own assessments and I am not an expert on batteries. Check with BadAttitude if you want true expert advice regarding stacking batteries.
To be read at double speed -
Just my opinion, worth what you're paying for it. No warranty or guaranty is expressed or implied. Your results an mileage may vary. The reader implicitly agrees to hold the poster free and harmless of any and all liability from damages whether real, consequential or imagined. I am not a scientist, physicist, chemist, engineer, doctor, hold no degrees in any recognized academic field, nor do I play any of them on TV. Proceed at your own risk.